PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast03G115600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 97aa    MW: 10412.7 Da    PI: 6.1248
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast03G115600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.55e-101482265
                 NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrd 65
                         p f+F+Ptd++lv +yL ++  g + + e+++ e++   + Pw+  +     ++++  ++ +fFs+  
  Brast03G115600.1.p 14 SPAFKFDPTDDDLVRHYLLPHSLGLSGPHEHAVIEANPGGLSPWEVLErhgidMFSGAAEQAFFFSPVP 82
                        689*********************99888788999**********963356655555667889999765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.93E-14583IPR003441NAC domain
PROSITE profilePS5100514.9691396IPR003441NAC domain
PfamPF023651.4E-61581IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
MVAASYGFNQ PGLSPAFKFD PTDDDLVRHY LLPHSLGLSG PHEHAVIEAN PGGLSPWEVL  60
ERHGIDMFSG AAEQAFFFSP VPNAGRMVHM VRHSSG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010229803.11e-46PREDICTED: NAC transcription factor NAM-B1-like
TrEMBLI1GXD44e-46I1GXD4_BRADI; Uncharacterized protein
STRINGBRADI1G36200.11e-45(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1861527